DeCypher Results for: Protein Multiple Alignment

View dendrogram

DshDros         ---MDADRGGGQETKVIYHIDDETTPYLVKIPIPSAQVTLRDFKLVLN-KQNNNYKYFFK
Dvl1mouse       ----------MAETKIIYHMDEEETPYLVKLPVAPERVTLADFKNVLSNRPVHAYKFFFK
Dvl2mouse       MAGSSAGGGGVGETKVIYHLDEEETPYLVKIPVPAERITLGDFKSVLQ-RPAG-AKYFFK
Dvl3mouse       ----------MGETKIIYHLDGQETPYLVKLPLPAERVTLADFKGVLQ-RPS--YKFFFK
                            ***:***:* : ******:*:.. ::** *** **. :     *:***

DshDros         SMDADFGVVKEEIADDSTILPCFNGRVVSWLVSADGTNQ------SDN-------CSELP
Dvl1mouse       SMDQDFGVVKEEIFDDNAKLPCFNGRVVSWLVLAEGAHSDAGSQGTDS-------HTDLP
Dvl2mouse       SMDQDFGVVKEEISDDNARLPCFNGRVVSWLVSSDTPQPEVAPPAHESRTELVPPPPPLP
Dvl3mouse       SMDDDFGVVKEEISDDNAKLPCFNGRVVSWLVSAEGSHPEPAPFCADN-------PSELP
                *** ********* **.: ************* :: .:        :.        . **

DshDros         TSECELGMGLTNRKLQQQQQQHQQ-QQQQQQQQHQQQQQQQQQQVQPVQLAQQQQQQ--V
Dvl1mouse       PP-LERTGGIGDSRPPSFQPNVAS-SRDGMDNETGTESMVSHRRERARRRN-RDEAA---
Dvl2mouse       PLPPERTSGIGDSRPPSFHPNVSS-SHENLEPETETESVVSLRRDRPRRRDSSEHGAGGH
Dvl3mouse       PS-MERTGGIGDSRPPSFHPHASGGSQENLDNDTETDSLVSAQRERPRRRDGPEHAA---
                .   *   *: : :  . : :    .::  : :   :.  . :: :. :    :.

DshDros         LHHQKMMGNPLLQPPPLTYQSASVLSSDLDSTSLFGTESELTLDR--DMTDYSSVQRLQV
Dvl1mouse       RTNGHPRGDRRRDLGLPPDSASTVLSSELESSSFIDSDEEDNTSRLSSSTEQSTSSRLVR
Dvl2mouse       RPGGPSRLER--HLAG-YESSSTLMTSELESTSLGDSDEDDTMSRFSSSTEQSSASRLLK
Dvl3mouse       RLNGTTKGERRREPGG-YDSSSTLMSSELETTSFFDSDEDDSTSRFSSSTEQSSASRLMR
                        :   .      .::::::*:*:::*: .::.: . .*  . *: *: .**

DshDros         RKKPQRRKKRAPSMSRTSSYSSITDSTMSLNIITVSINMEAVNFLGISIVGQSNRGGDGG
Dvl1mouse       KHKCRRRKQRLRQTDRASSFSSITDSTMSLNIITVTLNMERHHFLGISIVGQSNDRGDGG
Dvl2mouse       RHRRRR-KQRPPRMERTSSFSSVTDSTMSLNIITVTLNMEKYNFLGISIVGQSNERGDGG
Dvl3mouse       RHKRRRRKQKVSRIERSSSFSSITDSTMSLNIITVTLNMEKYNFLGISIVGQSNERGDGG
                ::: :* *::    .*:**:**:************::***  :***********  ****

DshDros         IYVGSIMKGGAVALDGRIEPGDMILQVNDVNFENMTNDEAVRVLREVVQKPGPIKLVVAK
Dvl1mouse       IYIGSIMKGGAVAADGRIEPGDMLLQVNDVNFENMSNDDAVRVLREIVSQTGPISLTVAK
Dvl2mouse       IYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAK
Dvl3mouse       IYIGSIMKGGAVAADGRIEPGDMLLQVNEINFENMSNDDAVRVLREIVHKPGPITLTVAK
                **:********** *********:****::*****:**:******::* :.*** *.***

DshDros         CWDPNPKGYFTIPRTEPVRPIDPGAWVAHTQALT------SHDSIIADIAE---------
Dvl1mouse       CWDPTPRSYFTIPRADPVRPIDPAAWLSHTAALTGALPRYGTSPCSSAITRTSSSSLTSS
Dvl2mouse       CWGPSPQAYFTLPRNEPIQPIDPAAWVSHSAALTGAFPAYPGSSSMSTITS--GSS----
Dvl3mouse       CWDPSPRGCFTLPRSEPIRPIDPAAWVSHTAAMTGTFPAYGMSPSLSTITST-SSSITSS
                **.*.*:. **:** :*::****.**::*: *:*        ..  : *:

DshDros         -PIKERLD------QNNLEEIVKAMTKPDSGLEIRDRMWLKITIPNAFIGADAVNWVLEN
Dvl1mouse       VPGAPQLEEAPLTVKSDMSAIVRVMQLPDSGLEIRDRMWLKITIANAVIGADVVDWLYTH
Dvl2mouse       LPD--GCEGRGLSVHMDMASVTKAMAAPESGLEVRDRMWLKITIPNAFLGSDVVDWLYHH
Dvl3mouse       IPDTERLDDFHLSIHSDMAAIVKAMASPESGLEVRDRMWLKITIPNAFIGSDVVDWLYHN
                 *     :      : ::  :.:.*  *:****:**********.**.:*:*.*:*:  :

DshDros         VEDVQDRREARRIVSAMLRSNYIKHTVNKLTFSEQCYYVVNEERNPNLLGRGHLHPHQLP
Dvl1mouse       VEGFKERREARKYASSMLKHGFLRHTVNKITFSEQCYYVFGDLCS-------NLASLNLN
Dvl2mouse       VEGFPERREARKYASGLLKAGLIRHTVNKITFSEQCYYVFGDLSGG---CESYLVNLSLN
Dvl3mouse       VEGFTERREARKYASNLLKAGFIRHTVNKITFSEQCYYIFGDLCG-------NMANLSLH
                **.. :*****: .* :*: . ::*****:********:..:  .        :   .*

DshDros         HGHGGHALSHADTESITSDIGPLPNPPIY-MPYSATYNPSHGYQPIQYGIAERH--ISSG
Dvl1mouse       --SGSSGASDQDTLAPLPH-PSVPWPLGQGYPYQYP-GP-PPCFP-PA-YQDPG-FSCGS
Dvl2mouse       DNDGSSGASDQDTLAPLP--GATPWPLLPTFSYQYP-AP-HPYSPQPPPYHELSSYTYGG
Dvl3mouse       DHDGSSGASDQDTLAPLPHPGAAPWPMA--FPYQYPPPP-HPYNPHPG-FPELG-YSYGG
                   *. . *. ** :  .   . * *     .*. .  *     *      :      ..

DshDros         SSSSD--VLTSKDTSASQS--DITSVIHQANQLTIAAHG-SNKSSGSSNR------GGGG
Dvl1mouse       GSAGSQQSEGSKSSGSTRS---SHRTPGREERRATGAGG-SGSESDHTVP------SGS-
Dvl2mouse       GSASSQHSEGSRSSGSTRSDGGAGRTGRPEERAPESKSG-SGSESELSSRGGSLRRGGEP
Dvl3mouse       GSASSQHSEGSRSSGSNRS--GSDRRKEKDPKAGDSKSGGSGSESDHTTR-SSLRGPRER
                .*:..     *:.:.:.:*            :   .  * *...*  :

DshDros         GGGGGGNNTNDQDVSVSNYVL---------------------------------------
Dvl1mouse       GSTGWWERPVSQLSRGS------SPR---SQASAVAPGLPPLH--PLTKAYAVVG-----
Dvl2mouse       GGTGDGGPPPSRGSTGAPPNLRALPG---LHPYGAPSGMALPYNPMMVVMMPPPPPPVST
Dvl3mouse       APSERSGPAASEHSHRSHHSLTSSLRSHHTHPSYGPPGVPPLYGPPMLMMTPPPG-----
                .       . ..    :

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Job Details

[BEGIN JOB STATUS]

[BEGIN CLUSTALW TIME] Tue Jul 27 10:20:47 1999
[END CLUSTALW TIME] Tue Jul 27 10:20:56 1999
[VERSION] 5.0.0.296 
[SEARCH ID] CGI_376wsc8e64.tl6
[EOL] CRLF
[COMMENT] /Comment=Protein Multiple Alignment
[COMMENT] /CGI_Ver=5.1.0.21
[ALGORITHM] CW
[QUERY FORMAT] FASTA/PEARSON
[QUERY TYPE] AA
[QUERY SEARCH] 1
[QUERY PATH] d:\decypher\query
[QUERY SET] CGI_376wsc8e64.seq
[TARGET TYPE] AA
[RESULT PATH] d:\decypher\output
[OUTPUT FORMAT] TEXT PERCENTAGE



[CLUSTALW RESULTS]


 CLUSTAL W (1.7) Multiple Sequence Alignments



Sequence type explicitly set to Protein
Sequence format is Pearson
Sequence 1: DshDros         623 aa
Sequence 2: Dvl1mouse       695 aa
Sequence 3: Dvl2mouse       736 aa
Sequence 4: Dvl3mouse       716 aa
Start of Pairwise alignments
Aligning...
Sequences (1:2) Aligned. Score:  41
Sequences (1:3) Aligned. Score:  41
Sequences (1:4) Aligned. Score:  44
Sequences (2:3) Aligned. Score:  60
Sequences (2:4) Aligned. Score:  63
Sequences (3:4) Aligned. Score:  67
Guide tree        file created:   [d:\decypher\query\CGI_376wsc8e64.dnd]
Start of Multiple Alignment
There are 3 groups
Aligning...
Group 1: Sequences:   2      Score:10615
Group 2: Sequences:   3      Score:9834
Group 3: Sequences:   4      Score:4513
Alignment Score 12466
CLUSTAL-Alignment file created  [d:\decypher\output\cgi_376wsc8e64.out.aln]





[JOB MESSAGES]
Message=CGI_376wsc8e64.tl6 had no errors.

[END JOB STATUS]