Axel Polleres, Maulik R. Kamdar, Javier D. Fernandez, Tania Tudorache, and Mark A. Musen
Workshop on Decentralizing the Semantic Web at the 17th International Semantic Web Conference, Monterey, October 2018
In this deliberately provocative position paper, we claim that ten years into Linked Data there are still (too?) many unresolved challenges towards arriving at a truly machine-readable and decentralized Web of data. Read More
...Maulik R. Kamdar
The Web Conference (PhD Symposium Track), Lyon, April 2018
The vision of the Semantic Web has stimulated the development of Web-scale architectures for discovering implicit associations from multiple heterogeneous data and knowledge sources. In biomedicine, Read More
...Lichy Han* and Maulik R. Kamdar*
23rd Pacific Symposium on Biocomputing, Big Island of Hawaii, January 2018
Glioblastoma Multiforme (GBM), a malignant brain tumor, is among the most lethal of all cancers. Temozolomide is the primary chemotherapy treatment for patients diagnosed with GBM. The methylation status of theRead More
...Download | Pubmed | Code | Application | Poster
Maulik R. Kamdar, Simon Walk, Tania Tudorache and Mark A. Musen
Journal of Web Semantics, March 2018
Biomedical ontologies are large: Dozens of ontologies in the BioPortal repository contain thousands or even hundreds of thousands of entities. The development and maintenance of such large ontologies Read More
...Article | Slides | Code | Poster | Application | BEST POSTER AWARD | INVITED TALK
Maulik R. Kamdar, and Mark A. Musen
American Medican Informatics Association Annual Symposium, Washington, November 2017
Adverse drug reactions (ADR) result in significant morbidity and mortality in patients, and a substantial proportion of these ADRs are caused by drug--drug interactions (DDI). Pharmacovigilance Read More
...Download | Slides | Visualization | DISTINGUISHED PAPER AWARD
Maulik R. Kamdar, Simon Walk, Tania Tudorache and Mark A. Musen
16th International Semantic Web Conference, Vienna, October 2017
BiOnIC is a catalog of aggregated statistics of user clicks, queries, and reuse counts for access to over 200 biomedical ontologies. BiOnIC also provides anonymized sequences of classes accessedRead More
...Download | Data | Slides | Application | BEST STUDENT PAPER AWARD | NSF TRAVEL AWARD
Maulik R. Kamdar and Mark Musen
26th World Wide Web Conference, Perth, April 2017
Integrated approaches for pharmacology are required for the mechanism-based predictions of adverse drug reactions that manifest due to concomitant intake of multiple drugs. These approaches Read More
...Download | ACM Library | Slides | Code | Poster | Visualization | BEST POSTER AWARD
Maulik R. Kamdar, Tania Tudorache and Mark Musen
Semantic Web – Interoperability, Usability, Applicability, February 2016
Reusing ontologies and their terms is a principle and best practice that most ontology development methodologies strongly encourage. Reuse comes with the promise to support the semantic interoperabilityRead More
...Article | Slides | Code | Poster | Data | Visualization | BEST POSTER AWARD | INVITED TALK
Maulik R. Kamdar* and Michelle Wu*
21st Pacific Symposium on Biocomputing, Big Island of Hawaii, January 2016
Neuropsychiatric disorders are the leading cause of disability worldwide and there is no gold standard currently available for the measurement of mental health. This issue is exacerbatedRead More
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Maulik R. Kamdar and Michel Dumontier
Database: The Journal of Biological Databases and Curation, April 2015
Ebola Virus (EBOV), of the family Filoviridae viruses, is a NIAID category A, lethal human pathogen. It is responsible for causing the Ebola Virus Disease (EVD) that is a severe hemorrhagic feverRead More
...Maulik R. Kamdar, Tania Tudorache and Mark Musen
6th International Conference on Biomedical Ontology, Lisbon, July 2015
We investigate the current extent of term reuse and overlap among biomedical ontologies. We use the corpus of biomedical ontologies stored in the BioPortal repository, and analyze three types of reuseRead More
...Download | Slides | Poster | Data | Code | Visualization | BEST POSTER AWARD
Ali Hasnain, Syeda Sana e Zainab, Maulik R. Kamdar, Qaiser Mehmood, Claude N. Warren, Jr, Qurratal Ain Fatimah, Helena F. Deus, et al.
4th Joint International Semantic Technology Conference, Chiang Mai, November 2014
Multiple datasets that add high value to biomedical research have been exposed on the web as a part of the Life Sciences Linked Open Data (LSLOD) Cloud. The ability to easily navigate through these datasets Read More
...Muhammad Saleem, Maulik R. Kamdar, Aftab Iqbal, Shanmukha Sampath, Helena F. Deus and Axel-Cyrille Ngonga
Web Semantics: Science, Services and Agents on the World Wide Web, October 2014
The amount of bio-medical data available on the Web grows exponentially with time. The resulting large volume of data makes manual exploration very tedious. Moreover, the velocity at which this data Read More
...Laleh Kazemzadeh, Maulik R. Kamdar, Oya D. Beyan, Stefan Decker and Frank Barry
4th Workshop on Linked Science at the 13th International Semantic Web Conference, Riva Del Garda, October 2014
Understanding the dynamics of protein-protein interactions(PPIs) is a cardinal step for studying human diseases at the molecular level. Advances in "-omics" technologies has resulted in a deluge of biological dataRead More
...Ali Hasnain, Maulik R. Kamdar, Panagiotis Hasapis, Dimitris Zeginis, Claude N. Warren, Jr., Helena F. Deus, Dimitrios Ntalaperas, et al.
13th International Semantic Web Conference (In-use Track), Riva Del Garda, October 2014
The increase in the volume and heterogeneity of biomedical data sources has motivated researchers to embrace Linked Data (LD) technologies to solve the ensuing integration challenges and enhance informationRead More
...Maulik R. Kamdar, Aftab Iqbal, Muhammad Saleem, Helena F. Deus and Stefan Decker
7th Conference on Semantics in Healthcare and Life Sciences, Boston, February 2014
Cancer genomics researchers have greatly benefited from high-throughput technologies for the characterization of genomic alterations in patients. These voluminous genomics datasets when supplemented withRead More
...Maulik R. Kamdar, Dimitris Zeginis, Ali Hasnain, Stefan Decker and Helena F. Deus
Journal of Biomedical Informatics, February 2014
Bioinformatics research relies heavily on the ability to discover and correlate data from various sources. The specialization of life sciences over the past decade, coupled with an increasing number of biomedicalRead More
...Article | Slides | Code | Pubmed | Poster | Video | Demo | BEST POSTER AWARD
David Croft, Antonio F. Mundo, Robin Haw, Marija Milacic, Joel Weiser, Guanming Wu, Michael Caudy, Phani Garapati, Marc Gillespie,
Maulik R. Kamdar, Bijay Jassal, Steven Jupe, Lisa Matthews, Bruce May, Stanislav Palatnik, Karen Rothfels, Veronica Shamovsky, et al.
Nucleic Acids Research (Database Issue), January 2014
Reactome (http://www.reactome.org) is a manually curated open-source open-data resource of human pathways and reactions. The current version 46 describes 7088 human proteins (34% of the predicted human ... Read More
Muhammad Saleem, Maulik R. Kamdar, Aftab Iqbal, Shanmukha Sampath, Helena F. Deus and Axel-Cyrille Ngonga
Semantic Web Challenge in the 12th International Semantic Web Conference, Sydney, October 2013
The amount of bio-medical data available over the Web grows exponentially with time. The large volume of the currently available data makes it difficult to explore, while the velocity at which this data changes andRead More
...Download | Slides | Code | Poster | Demo | BIG DATA PRIZE | WALL STREET JOURNAL
Prabuddha Dey, Maulik R. Kamdar, Santi M. Mandal and Mrinal K. Maiti
Protein and Peptide Letters, February 2013
An extracellular antifungal protein of 28 kDa (exAFP-C28) was identified from an endophytic fungus Colletotrichum sp. DM-06. After purification, the MIC value of exAFP-C28 against Candida albicans, a well-knownRead More
...Richard Cyganiak, Maulik Kamdar, Fadi Maali, Deirdre Lee and Stefan Decker
Open Data Ireland Support Project, 2014
Maulik R. Kamdar, Simon Walk, Tania Tudorache and Mark Musen
BMI Retreat, September 2017
Maulik R. Kamdar and Mark Musen
BMI Retreat, September 2016
Gordon Research Conference on Advanced Health Informatics, September 2015
Maulik R. Kamdar, Tania Tudorache and Mark Musen
BMI Retreat, September 2015
Maulik R. Kamdar and Michel Dumontier
Bio-X Interdisciplinary Initiatives Seed Grant Symposium, February 2015
Lichy Han and Maulik Kamdar
CS 231N Poster Presentation, June 2017
Maulik R. Kamdar
CS 224D Poster Presentation, June 2016
Lichy Han, Maulik Kamdar and Daniel Kim
CS 224W Poster Presentation, December 2015
Big Data in Biomedicine Conference, May 2016
Lichy Han, Winn Haynes, Maulik Kamdar and Alejandro Schuler
BMI 210 Poster Presentation, March 2015
Big Data in Biomedicine Conference, May 2015
Maulik R. Kamdar
CS 229 Poster Presentation, December 2014
Maulik R. Kamdar, Dimitris Zeginis, Ali Hasnain, Stefan Decker and Helena F. Deus
10th Summer School on Ontology Engineering and the Semantic Web,
Cercedilla, July 2013
Invited Talk at the International Semantic Web Conference (ISWC 2018) - October, 2018
Invited Talk at the International Semantic Web Conference (ISWC 2018) - October, 2018
Stanford Biomedical Informatics Program Defense Talk - 7 June, 2018
The Web Conference 2018 - 24 April, 2018
American Medican Informatics Association Annual Symposium (AMIA 2017) - 7 November, 2017
16th International Semantic Web Conference (ISWC 2017) - 24 October, 2017
26th World Wide Web Conference (WWW 2017) - 4 April, 2017
Pacific Symposium on Biocomputing - 6 January, 2016
International Conference on Biomedical Ontology - 29 July, 2015
Protege Friday Research Seminar - 3 April, 2015
DERI Friday Research Seminar - 5 April, 2013
CS 221 Project, September-December 2015
Data.gov.ie, March-May 2014
Visualizing.org Challenge: Visualizing Meteorites
Read More | Code | Demo | CHROME EXPERIMENT
10th Summer School on Ontology Engineering and the Semantic Web,
Cercedilla, July 2013
Kshitij: The Annual Techno-Management Symposium of IIT Kharagpur, 2009-10
Meghnad Saha Hall of Residence, 2009-10