Aaron Goodman

aaron goodman 

Aaron Goodman, Ph.D.

Dissertation Title:
Dynamics of Microbial Communities: Ecological,
Game Theoretic, and Evolutionary Perspectives
Stanford University
Advisor: Marcus Feldman
Curriculum Vitae


Herrin Hall, Stanford, CA 94305

Research Interests


Goodman, A. Learning multiagent coordination in the absence of communication channels (preprint available).

Goodman, A. and Marcus W. Feldman. Evolution of hierarchy in bacterial metabolic networks. Biosystems, 180:71–78, June 2019

Tilk, S., Bergland, A. O., Goodman, A., Schmidt, P., Petrov, D., Greenblum, S. High accuracy haplotype-derived allele frequencies from ultra-low coverage pool-seq samples. In preparation (preprint available).

Goodman, A. J., Daugharthy, E. R., & Kim, J. (2013). Pervasive antisense transcription is evolutionarily conserved in budding yeast. Molecular Biology and Evolution, 30(2), 409–21. http://doi.org/10.1093/molbev/mss240

Singh, N. K., Goodman, A., Walter, P., Helms, V., & Hayat, S. (2011). TMBHMM: a frequency profile based HMM for predicting the topology of transmembrane beta barrel proteins and the exposure status of transmembrane residues. Biochimica et Biophysica Acta, 1814(5), 664–70. http://doi.org/10.1016/j.bbapap.2011.03.004

Conference Presentations

2018 StanCon, Asilomar, California

2016 Society for Molecular Biology and Evolution, Gold Cost, Australia

2015 Society for Molecular Biology and Evolution, Vienna, Austria

2010 Evolution, Portland, Oregon