Structure searching in CAS Online using STN Express:
An introductory workshop
Structure searching worksheet
- Type of structure search needed?
- ___ Exact
- ___ Family
- ___ Closed Substructure (CSS)
- ___ Substructure (SSS) (default)
- Want rings in answers to be fused to other ring systems, spiro-attached
to other ring systems, or isolated from other ring systems?
- Ring Fusion
- ___ Isolated/Embedded (default)
- ___ Isolated
- What values are desired for nodes?
- Node Values
- ___ Atom
- ___ Shortcut
- ___ System-defined variable
- ___ Variable point of attachment
- ___ G-group
- Node Values — Specific vs. Generic
- Want atoms in structure to be part of a ring or a chain in answers?
- Node Characteristics
- ___ Ring (default for atoms in rings)
- ___ Chain (default for atoms in chains)
- ___ Ring/chain
- What values desired in structure?
- Bond Values
- ___ Single
- ___ Single/Normalized
- ___ Double
- ___ Double/Normalized
- ___ Triple
- ___ Stereo
- ___ Unspecified
- Want bonds in structure to be part of a ring or a chain in answers?
- Bond Characteristics
- ___ Ring (default for bonds in rings)
- ___ Chain (default for bonds in chains)
- ___ Ring/chain
- Want to block substitution at a position(s)?
- ___ Draw in hydrogen atoms
- ___ Do Exact or Family search
- Want to force substitution at a position(s)?
- ___ Use system-defined variable groups
- ___ Do CSS or SSS search
- Want to define substitution at a position(s)?
- ___ Use G-groups
- ___ Do SSS search