OpenMPI
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(Difference between revisions)
| Line 1: | Line 1: | ||
| - | OpenMPI v1.4. | + | OpenMPI v1.4.5 is installed. |
Looks like the Debian package is not compiled with "SGE support": | Looks like the Debian package is not compiled with "SGE support": | ||
| Line 11: | Line 11: | ||
You should use the "qsub method" from that page to submit jobs to ge, so something like | You should use the "qsub method" from that page to submit jobs to ge, so something like | ||
<pre> | <pre> | ||
| - | shell$ qsub -pe orte 4 my_mpirun_job. | + | shell$ qsub -pe orte 4 my_mpirun_job.sh |
</pre> | </pre> | ||
Latest revision as of 11:36, 14 September 2013
OpenMPI v1.4.5 is installed.
Looks like the Debian package is not compiled with "SGE support":
barley01:/root# ompi_info | grep grid
I created a PE in grid engine called "orte", following this: http://www.open-mpi.org/faq/?category=running#run-n1ge-or-sge
You should use the "qsub method" from that page to submit jobs to ge, so something like
shell$ qsub -pe orte 4 my_mpirun_job.sh
