Acquiring Data Analysis Tools
1. GenePix
Pro3.0 Microarray Analysis Software (Axon Instruments, Inc). Acquires
antigen feature intensity data in a
form compatible with Microsoft Excel.
2. ScanAlyze2
(Michael Eisen's laboratory).
Converts images contained in TIF files acquired from scanner into BMP files.
3. Cluster and
Treeview (Michael Eisen's laboratory). Provides cluster
analysis algorithms and graphical representation of data.
4. Significance
Analysis of Microarrays (SAM) (Robert
Tibshirani and Gilbert
Chu). Identifies statistically significant differences in
microarray data sets.
