View dendrogram
MmLRP5 -------------------------------------------------------METAP MmLRP6 ------------------------------------------------------------ DmArrow MALEPYTKSAEIEPQLCQVIDNNEDVTTKATKCVKSNSGVGWRQMLIGFLLICFGISNSW MmLRP5 TRAPPPPPPPLLLLVLYCSLVPAAASPLLLFANRRDVRLVDAG--GVKLESTIVASGLED MmLRP6 ------MGAVLRSLLACSFCVLLRAAPLLLYANRRDLRLVDAT--NGKENATIVVGGLED DmArrow QYKNVHMPSSSSLIASPPASAFVNTPATLLFTTRHDIQVANITRPTGGPQIDVIVRDLAE MmLRP5 AAAVDFQFSKGAVYWTDVSEEAIKQTYLNQTG------AAAQNIVISGLVSPDGLACDWV MmLRP6 AAAVDFVFGHGLIYWSDVSEEAIKRTEFNKS-------ESVQNVVVSGLLSPDGLACDWL DmArrow AMAIDFYYAKNLVCWTDSGREIIECAQTNSSALQPLLRAPKQTVISTGLDKPEGLAIDWY MmLRP5 GKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGEAPRIER MmLRP6 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIER DmArrow TDKIYWTDGEKNRIEVATLDGRYQKVLFWTDLDQPRAVAVVPARKLLIWTDWGEYPKIER MmLRP5 AGMDGS--TRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVEGS MmLRP6 AGMDGS--SRFVIINTEIYWPNGLTLDYQERKLYWADAKLNFIHKSNLDGTNRQAVVKGS DmArrow ASMDGDPLSRMTLVKEHVFWPNGLAVDLKNELIYWTDGKHHFIDVMRLDGSSRRTIVN-N MmLRP5 LTHPFALTLSGDTLYWTDWQTRSIHACNKWTGEQRKEILSALYSPMDIQVLSQERQPPFH MmLRP6 LPHPFALTLFEDTLYWTDWNTHSILACNKYTGEGLREIHSNIFSPMDIHAFSQQRQPNAT DmArrow LKYPFSLTFYDDRLYWTDWQRGSLNALDLQTRE-LKELIDTPKAPNSVRAWDPSLQPYED MmLRP5 TPCEEDNGGCSHLCLLSPREPFYSCACPTGVQLQDNGKTCKTGAEEVLLLARRTDLRRIS MmLRP6 NPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLMENGKTCKDGATELLLLARRTDLRRIS DmArrow NPCAHNNGNCSHLCLLATNSKGFSCACPTGVKLI-SANTCANGSQEMMFIVQRTQISKIS MmLRP5 LDTPDFTDIVLQVGDIRHAIAIDYDPLEGYVYWTDDEVRAIRRAYLDGSGAQTLVNTEIN MmLRP6 LDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIA DmArrow LDSPDYTIFPLPLGKVKYAIAIDYDPVEEHIYWSDVETYTIKRAHADGTGVTDFVTSEVR MmLRP5 DPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSEDLDEPRAIVLHPVMGLMYWT MmLRP6 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWT DmArrow HPDGLALDWLARNLYWTDTVTDRIEVCRLDGTARKVLIYEHLEEPRAIAVAPSLGWMFWS MmLRP5 DWGE-NPKIECANLDGRDRHVLVNTSLGWPNGLALDLQEGKLYWGDAKTDKIEVINIDGT MmLRP6 DWGE-IPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGTIYWGDAKTDKIEVMNTDGT DmArrow DWNERKPKVERASLDGSERVVLVSENLGWPNGIALDIEAKAIYWCDGKTDKIEVANMDGS MmLRP5 KRKTLLEDKLPHIFGFTLLGDFIYWTDWQRRSIERVHKVKAS-RDVIIDQLPDLMGLKAV MmLRP6 GRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAE-REVIIDQLPDLMGLKAT DmArrow GRRVVISDNLKHLFGLSILDDYLYWTDWQRRSIDRAHKITGNNRIVVVDQYPDLMGLKVT MmLRP5 NVAKVVGTNPCADGNGGCSHLCFFTPRATKCGCPIGLELLSDMKTCIIPEAFLVFTSRAT MmLRP6 SVHRVIGSNPCAEDNGGCSHLCLYRPQGLRCACPIGFELIGDMKTCIVPEAFLLFSRRAD DmArrow RLREVRGQNACAVRNGGCSHLCLNRPRDYVCRCAIDYELANDKRTCVVPAAFLLFSRQEH MmLRP5 IHRISLE---TNNNDVAIPLTGVKEASALDFDVSNNHIYWTDVSLKTISRAFMNGSSVEH MmLRP6 IRRISLE---TNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEH DmArrow IGRISIEYNEGNHNDERIPFKDVRDAHALDVSVAERRIYWTDQKSKCIFRAFLNGSYVQR MmLRP5 VIEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWRDLDNPRSLALDPT MmLRP6 VVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPA DmArrow IVDSGLIGPDGIAVDWLANNIYWSDAEARRIEVARLDGSSRRVLLWKGVEEPRSLVLEPR MmLRP5 KGYIYWTEWGGKPRIVRAFMDGTNCMTLVDKVGRANDLTIDYADQRLYW-TDLDTNMIES MmLRP6 EGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYW-TDLDTNLIES DmArrow RGYMYWTE-SPTDSIRRAAMDGSDLQTIVAGANHAAGLTFDQETRRLYWATQSRPAKIES MmLRP5 SNMLGQERMV-IADDLPYPFGLTQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFV MmLRP6 SDMLGLNREV-IADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYV DmArrow ADWDGKKRQILVGSDMDEPYAVSLYQDYVYWSDWNTGDIERVHKTTGQNRSLVHSGMTYI MmLRP5 MDILVFHSSRQDGLNDCVHSNGQCGQLCLAIP--GGHRCGCASHYTLDPSSRNCSPPSTF MmLRP6 MDILVFHSSRQAGWNECASSNGHCSHLCLAVPV-GGFVCGCPAHYSLNADNRTCSAPSTF DmArrow TSLLVFNDKRQTGVNPCKVNNGGCSHLCLAQPGRRGMTCACPTHYQLAKDGVSCIPPRNY MmLRP5 LLFSQKFAISRMIPDDQLSPDLVLPLHGLRNVKAINYDPLDKFIYWVDGRQN-IKRAKDD MmLRP6 LLFSQKSAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNSIRKAHED DmArrow IIFSQRNSFGRLLPNTTDCPNIPLPVSG-KNIRAVDYDPITHHIYWIEGRSHSIKRSLAN MmLRP5 GTQP-SMLTSPSQSLSPDRQPHDLSIDIYSRTLFWTCEATNTINVHRLDGDAMGVVLRGD MmLRP6 GGQGFNVVANSVANQNLEIQPYDLSIDIYSRYIYWTCEATNVIDVTRLDGRSVGVVLKGE DmArrow GTKV-------SLLANSG-QPFDLAIDIIGRLLFWTCSQSNSINVTSFLGESVGVIDTGD MmLRP5 RDKPRAIAVNAERGYMYFTNMQDHAAKIERASLDGTEREVLFTTGLIRPVALVVDNALGK MmLRP6 QDRPRAIVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSKLGK DmArrow SEKPRNIAVHAMKRLLFWTDVGSHQAII-RARVDGNERVELAYK-LEGVTALALDQQSDM MmLRP5 LFWVDADLKRIESCDLSGANRLTLEDANIVQPVGLTVLGRHLYWIDRQQQMIERVEKTTG MmLRP6 LFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGR DmArrow IYYAHG--KRIDAIDINGKNKKTLVSMHISQVINIAALGGFVYWLDDKTG-VERI-TVNG MmLRP5 DKRTRVQGRVTHLTGIHAVEEVSLEEFSAHPCARDNGGCSHICIAKGDGTPR----CSCP MmLRP6 EGRTKVQARIAQLSDIHAVKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTR----CSCP DmArrow ERRSAELQRLPQITDIRAVWTPDPKVLRNHTCMHSRTKCSHICIASGEGIARTRDVCSCP MmLRP5 VHLVLLQNLLTCGEPPTCSPDQFACTTG-------EIDCIPGAWRCDGFPECADQSDEEG MmLRP6 MHLVLLQDELSCGEPPTCSPQQFTCFTG-------DIDCIPVAWRCDGFTECEDHSDELN DmArrow KHLMLLEDKENCGAFPACGPDHFTCAAPVSGISDVNKDCIPASWRCDGQKDCPDKSDEVG MmLRP5 CPVCSASQFPCARGQCVDLRLRCDGEADCQDRSDEANCDAVCLPNQFRCT-SGQCVLIKQ MmLRP6 CPVCSESQFQCASGQCIDGALRCNGDANCQDKSDEKNCEVLCLIDQFRCA-NGQCVGKHK DmArrow CPTCRADQFSCQSGECIDKSLVCDGTTNCANGHDEADC--CKRPGEFQCPINKLCISAAL MmLRP5 QCDSFPDCADGSDELMCEINKPPSDDIPAHSSAIGPVIGIILSLFVMGGVYFVCQRVMCQ MmLRP6 KCDHSVDCSDRSDELDC---YPTEEPAPQATNTVGSVIGVIVTIFVSGTIYFICQRMLCP DmArrow LCDGWENCADGADESSD---ICLQRRMAPATDKRAFMILIGATMITIFSIVYLLQ--FCR MmLRP5 RYTGASGPFPHEYVGGAP-HVPLNFIAPGGSQHGPFPGIPCSKSVMSSMSLVGGRGSVPL MmLRP6 RMKGDGETMTNDYVVHSPASVPLGYVPHPSSLSGSLPGMSRGKSMISSLSIMGG-SSGPP DmArrow TRIGKSRTEPKDDQATDP-------LSPSTLSKSQRVSKIASVADAVRMSTLNSRNSMNS MmLRP5 YDRNHVTGASSSSSSSTKATLYPPILNPPPSPATDPSLYNVDVFYSSGIPATARPY--RP MmLRP6 YDRAHVTGASSSSSSSTKGTYFPAILNPPPSPATERSHYTMEFGYSSNSPSTHRSYSYRP DmArrow YDRNHITGASSSTTNGSSMVAYP--INPPPSPAT----------------RSRRPY--RH MmLRP5 YVIRGMAPPTTPCSTDVCDSDYSISRWKSS----------------KYYLDLNSDSDPYP MmLRP6 YSYRHFAPPTTPCSTDVCDSDYAPSRRMTSV-----------ATAKGYTSDVNYDSEPVP DmArrow YKIINQPPPPTPCSTDICDESDSNYTSKSNSNNSNGGATKHSSSSAAACLQYGYDSEPYP MmLRP5 PPPTPHSQYLSAED-----SCPPSPGTERSYCH-LFPPPPSPCTDSS---- MmLRP6 PPPTPRSQYLSAEENY--ESCPPSPYTERSYSHHLYPPPPSPCTDSS---- DmArrow PPPTPRSHYHSDVRIVPESSCPPSPSSRSSTYFSPLPPPPSPVQSPSRGFT
Dendrogram Source Data ( MmLRP5:0.16380, MmLRP6:0.15672, DmArrow:0.42170);
[BEGIN JOB STATUS] [BEGIN CLUSTALW TIME] Tue Oct 11 10:45:21 2005 [END CLUSTALW TIME] Tue Oct 11 10:45:32 2005 [VERSION] 7.5.1.48 [SEARCH ID] CGI_Temp2132227eb80.tl6 [EOL] CRLF [CGI INTERFACE VERSION] 2 [CGI JOB TITLE] Mouse and Droso arrow/lrps [COMMENT] CGI_Ver=7.5.1.2 [ALGORITHM] CW [EXTEND PENALTY 2] -2 [DA LENGTH] 100 [QUERY SEARCH] 1 [QUERY TYPE] AA [QUERY PATH] d:\decypher\query/ [QUERY SET] CGI_Temp2132227eb80.seq [TARGET TYPE] AA [RESULT PATH] d:\decypher\output/CGI_Temp2132227eb80.out [HTML RESULT PATH] d:\decypher\output/CGI_Temp2132227eb80.html [OUTPUT FORMAT] LONGLOCUSNAME MAXSCORE PERCENTAGE PERCENTAGE EXTRACTALIGNED HTML WEB [CGI REFERING PAGE] http://decypher.stanford.edu/decypher/algo-cw/cw_ax.shtml [SET EMAIL ADDRESS] cfuerer@stanford.edu [CGI COOKIE] Set-Cookie: DeCypher=Email:cfuerer@stanford.edu&CW:CGI_Temp2132227eb80&IDP:CGI_Temp2132227eb80&OID:CGI_Temp2132227eb80&; ex [CLUSTALW RESULTS] CLUSTAL W (1.8) Multiple Sequence Alignments Sequence type explicitly set to Protein Sequence format is Pearson Sequence 1: MmLRP5 1614 aa Sequence 2: MmLRP6 1613 aa Sequence 3: DmArrow 1678 aa Start of Pairwise alignments Aligning... Sequences (1:2) Aligned. Score: 67 Sequences (1:3) Aligned. Score: 41 Sequences (2:3) Aligned. Score: 42 Guide tree file created: [d:\decypher\query\CGI_Temp2132227eb80.dnd] Start of Multiple Alignment There are 2 groups Aligning... Group 1: Sequences: 2 Score:29756 Group 2: Sequences: 3 Score:23820 Alignment Score 16260 CLUSTAL-Alignment file created [d:\decypher\output/cgi_temp2132227eb80.out.aln] [JOB MESSAGES] [END JOB STATUS]
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